HTR测试版使用说明:
      1、HTR是基于java语言开发的算法,程序的执行需要基于Java虚拟机(JDK),请根据计算机系统类型自行安装JDK,推荐安装JDK1.8及以上版本。
      2、在终端运行“makefile.sh”文件会自动将HTR文件安装到/usr/bin文件夹下。如果安装成功,输入:“htr”(或者“htr -h”) 会出现帮助文档。
      3、测试版仅输出了不同类型对应笼子的数量。计算后输出的结果可以在所分析的轨迹文件所在的文件夹下找到,输出文件夹和轨迹文件同名。“numOfCages”文件夹中为每一帧每种类型笼子的数量,其中文件0.txt表示第0帧文件中笼子数量;文件“output.cage”为几种常用笼子数量的汇总。
      4、0-12-0中的三个数字从左到右依次表示笼子中4,5,6元环数量,即0-12-0表示sI型5_12笼子。
      注:如您发现有bug请联系作者喲(^U^)ノ~YO 不胜感激。email:liu54614@foxmail.com

Instructions for HTR beta:
      1. HTR is an algorithm developed based on Java language. The Java virtual machine (JDK) is necessary for the execution of the HTR program. Please install JDK before the execution of HTR program. The jdk1.8 and above version is recommended.
      2. Running the "makefile. sh" in the Termimal will automatically install the HTR file into “/usr/bin”. If the HTR is successfully installed, execute the command “htr -h” (or “htr”) and you will get the help information.
      3. The output results can be found in the folder where the specified trajectory file is located, and the output folder has the same name as the trajectory file. The “Numofcages” folder includes the results of the number of cages of each type in each frame, of which 0.txt indicates the number of cages in frame 0 file. The file of “output.cage” is a summary of the number of several common cages.
      4. The three numbers in 0-12-0 represent the number of 4, 5 and 6-membered rings in the cage from left to right, e.g., 0-12-0 represents sI type 5_12 cages.
      Note: if you find a bug, please contact the author (^ u ^) yo ~ yo. Thank you very much. email: liu54614@foxmail.com